Figure 5.  Similarities between Exon 1 from AtFpg-1 and a class 1 DNA photolyase, 
as detected by ProfileScan.

                  .         .         .         .         .
S      2 PELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGT 51
         .:.| |||| | |       .  |||.|                ||| |.
P      2 TGYPIVDAAMRQLAAEGFMHNRVRMIVA................SFLTKD 35
                  .     
S     52 IISARRKGKNLWLEL 66
         |:  || |   ||| 
P     36 LFVDWREGERYFMDH 50

 Quality:  19.23       Gaps: 1 
   Ratio:   0.39     Length: 65 
 Normalized quality:  1.99 

References on photolyases
[ 1] Sancar G.B., Sancar A.,  Trends Biochem. Sci. 12:259-261(1987).
[ 2] Jorns M.S.,  Biofactors 2:207-211(1990).
[ 3] Yasui A., Eker A.P.M., Yasuhira S., Yajima H., Kobayashi T., Takao M.,
     Oikawa A.,  EMBO J. 13:6143-6151(1994).
[ 4] Lin C., Ahmad M., Cashmore A.R.,   Plant J. 10:893-902(1996).